| Date Added | Logo | Name |
| July 2002 | | Akhil Bharat Nepali Ekta Samaj (ABNES) |
| 1 April 2002 | | Al-Badr |
| April 1997 | | All Tripura Tiger Force (ATTF) |
| | | Al-Qaeda / al-Qaeda in the Indian Subcontinent |
| March 2023 | | Al-Umar-Mujahideen |
| | | Babbar Khalsa International |
| 22 June 2009 | | Communist Party of India (Maoist) / Maoist Communist Centre (MCC) |
| December 2004 | | Communist Party of India (Marxist–Leninist) People's War |
| 27 April 2000 | | Deendar Anjuman |
| 27 April 2018 | | Dukhtaran-e-Millat (DEM) |
| 12 January 2012 | | Garo National Liberation Army (GNLA) |
| 29 December 2004 | | Harkat-ul-Jihad al-Islami / Ansar-Ul-Ummah |
| | | Harkat-ul-Mujahideen / Harkat ul-Ansar / Jamiat ul-Ansar |
| 10 October 2023 | | Hizb ut-Tahrir |
| | | Hizbul Mujahideen / Hizbul Mujahideen Pir Panjal Regiment |
| 4 June 2010 | | Indian Mujahideen |
| 22 March 2002 | | International Sikh Youth Federation |
| 16 December 2014 | | Islamic State of Iraq and the Levant |
| | | Jaish-e-Mohammed / Tahrik-e-Furqan / People's Anti-Fascist Front (PAFF) |
| 23 May 2019 | | Jamiat-ul-Mujahideen / Jamaat-ul-Mujahideen Bangladesh |
| 17 February 2023 | | Jammu and Kashmir Ghaznavi Force (JKGF) |
| 30 December 2019 | | Jammu and Kashmir Islamic Front |
| 28 December 2013 | | Kamtapur Liberation Organisation |
| | | Kangleipak Communist Party (KCP) |
| | | Kanglei Yaol Kanba Lup (KYKL) |
| | | Khalistan Commando Force |
| 26 December 2018 | | Khalistan Liberation Force |
| February 2023 | | Khalistan Tiger Force (KTF) |
| | | Khalistan Zindabad Force |
| | | Lashkar-e-Taiba / Pasban-e-Ahle Hadis / The Resistance Front |
| May 1992 | | Liberation Tigers of Tamil Eelam (LTTE) |
| 13 December 2018 | | Manipur People's Liberation Front (MPLF) |
| 2015 | | National Democratic Front of Bodoland (NDFB) in Assam |
| April 1997 | | National Liberation Front of Tripura (NLFT) |
| 16 September 2015 | | National Socialist Council of Nagaland (Khaplang) |
| | | Organisations listed in the Schedule to the U.N. Prevention and Suppression of Terrorism (Implementation of Security Council Resolutions) Order, 2007 made under section 2 of the United Nations (Security Council) Act, 1947 and amended from time to time |
| 13 November 2023 | | People's Liberation Army (PLA) |
| | | People's Revolutionary Party of Kangleipak (PREPAK) |
| 6 August 2008 | | Students Islamic Movement of India (SIMI) |
| 2 July 2002 | | Tamil Nadu Liberation Army (TNLA) |
| 2 July 2002 | | Tamil National Retrieval Troops (TNRT) |
| | | Tehreek-ul-Mujahideen (TuM) |
| 1990 | | United Liberation Front of Assam (ULFA) |
| | | United National Liberation Front (UNLF) |